Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRLSWEDYFMANAELISKRSTCDRAFVGAVLVKNNRIIATGYNGGVSETDNCNEVGHYMEDGHCIRTVHAEMNALIQCAKEGISTNNTEIYVTHFPCINCTKALLQAGVKKITYKANYRPHPFAIELMEAKGVAYVQHDVPEVTLGMEE
2HVW Chain:A ((37-182))
-NRLSWQDYFMANAELISKRSTCNRAYVGAVLVKNNRIIATGYNGGVADTDNCDDVGHEMEDGHCIRTVHAEMNALIQCAKEGISANNTEIYVTHFPCINCTKALLQAGVKKITYNTAYRIHPFAIELMTQKEVEYVQHDVPRVKLGE--
General information:
TITO was launched using:
RESULT:
Template:
2HVW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98224 for 1150 contacts (-85.4/contact) +
2D Compatibility (PS) -16128 + (NN) -8678 + (LL) 520
1D Compatibility (HY) -20000 + (ID) 6350
Total energy: -148860.0 ( -129.44 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_2HVW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HVW-query.scw
PDB file :
Tito_Scwrl_2HVW.pdb
: