Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALEVTDATFVEETKEGLVLIDFWATWCGPCRMQAPILEQLSQEIDEDELKILKMDVDENPETARQFGIMSIPTLMFKKDGEVVKQVAGVHTKDQLKAIIAELS
2GZZ Chain:A ((4-100))
--VKATDQSFSAETSEGVVLADFWAPWCGPCKMIAPVLEELDQEMG-DKLKIVKIDVDENQETAGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQELVNKHL
General information:
TITO was launched using:
RESULT:
Template:
2GZZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53973 for 713 contacts (-75.7/contact) +
2D Compatibility (PS) -9670 + (NN) 2675 + (LL) 456
1D Compatibility (HY) -11600 + (ID) 2750
Total energy: -74862.0 ( -105.00 by residue)
QMean score : 0.665
(partial model without unconserved sides chains):
PDB file :
Tito_2GZZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GZZ-query.scw
PDB file :
Tito_Scwrl_2GZZ.pdb
: