Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLHFENDYNKGAHPELLNALIETNDQGLSGYGTDSYCQQAADKIREVCSCPQAEVE-FLVG-GTQTNQVVISSMLASYEGVIAAETGHVSSHEAGAIEF--SGHKVLTLPSHNGKLLASEVATYIETFYADGNYQHMVFPGMVYISHPTEYGTLYSKAELEELSKICKHYQIPLFIDGARLGYGLAAKDTDVDFPTIAALSDVFYIGGTKMGALAGEAVVFTKKNRPKQFTTIVKQHGALLAKGRLLGLAFDRFFTDDLYLKIGKHAIDLAEEL-KIILEEKGYSFYLKSPTNQQFVIVENTKLTDLAKNVAYSFWEKYDDH--HTVIRLATSWSTSREDVTALRNVL |
| 1V72 Chain:A ((10-344)) | -LGFSSDNIAGASPEVAQALVKHSSGQAGPYGTDELTAQVK---RKFCEIFERDVEVFLVPTGTAANALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGPAAKL---DIVRLRERTREKVGDVHTTQPACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGVLAAEAIVLFNTSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLDSAMIDALLK-AGFGF---YHDRWGPNVVRFVTSFATTAEDVDHLLNQV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200684 for 2873 contacts (-69.9/contact) +
2D Compatibility (PS) -35632 + (NN) -12778 + (LL) 936
1D Compatibility (HY) -18000 + (ID) 5000
Total energy: -271158.0 ( -94.38 by residue)
QMean score : 0.551
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