Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLKQAFIENDSIRLKLSASDWKEAIKLSIDPLIESGAVDAEYYDAIIESTEEFGPYYILMPGMAMPHARPEAGVKRDAFSLITLTEPVVFPDGKEVSVLLALAATSSAIHTSVAIPQIIALFELENSIQRLTECQEAKEVLAMVEESKNSPYLEGLDLES
2OQT Chain:A ((2-151))
-NLKQALIDNNSIRLGLSADTWQEAVRLAVQPLIDSKAVTSAYYDAIIASTEKYGPYYVLMPGMAMPHAEA-LGVNRNAFALITLTKPVTFSDGKEVSVLLTLAATDPSIHTTVAIPQIVALFELDNAIERLVACQSPKEVLEMVEESKDS----------
General information:
TITO was launched using:
RESULT:
Template:
2OQT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49294 for 1134 contacts (-43.5/contact) +
2D Compatibility (PS) -14759 + (NN) 2504 + (LL) 476
1D Compatibility (HY) -5200 + (ID) 2300
Total energy: -68573.0 ( -60.47 by residue)
QMean score : 0.329
(partial model without unconserved sides chains):
PDB file :
Tito_2OQT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OQT-query.scw
PDB file :
Tito_Scwrl_2OQT.pdb
: