Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKIIIVAHGNFPDGILSSLELIAGHQEYV--VGINFIAGMS--SNDVRVALQREVIDFKEILVLTDLLGGTPFNVSSALSVEYTDKKIKVLSGLNLSMLMEAVLSRTMFEHVDDLVDKVITSSHEGIVDFSTCLATQTAEATFEGGI
3LFH Chain:A ((6-110))
---VLIITHGDFGKGLLSGAEVIIGKQENVHTVGLNLGDNIEVVRKEVEKIIKEKLQEDKEIIIVVDLFGGSPFNIALSMMKEYD---VKVITGINMPMLVELLTSINVYDTTELLENISKIGKDGIKVI------------------
General information:
TITO was launched using:
RESULT:
Template:
3LFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97525 for 665 contacts (-146.7/contact) +
2D Compatibility (PS) -10990 + (NN) -1575 + (LL) 1732
1D Compatibility (HY) -12000 + (ID) 1850
Total energy: -122208.0 ( -183.77 by residue)
QMean score : 0.263
(partial model without unconserved sides chains):
PDB file :
Tito_3LFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LFH-query.scw
PDB file :
Tito_Scwrl_3LFH.pdb
: