Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIKEYENNPYHLAQLVDLINYCQNIEAKLDIKMAEQDDIFQIENYYQNRKGQFWIALEN-EKVVGSIALLRIDDKTAVLKKFFTYPKYRGNPVRLGRKLFERFMLFARASKFTRIVLDTPEKEKRSHFFYENQGFKQITRDELDVDYIFPDRDSRIYVKLLD
3D8P Chain:A ((8-161))
------EYNRSYKEELIEFILSIQKNEFNIKIDRDDQPDLENIEHNYLNSGGQFWLAINNHQNIVGTIGLIRLDNNMSALKKMFVDKGYRN--LKIGKKLLDKVIMTCKEQNIDGIYLGTIDKFISAQYFYSNNGFREIKRGDLPSSFPKL--DNRFYYRNLK
General information:
TITO was launched using:
RESULT:
Template:
3D8P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73575 for 1123 contacts (-65.5/contact) +
2D Compatibility (PS) -15857 + (NN) -5142 + (LL) 580
1D Compatibility (HY) -12800 + (ID) 2500
Total energy: -109294.0 ( -97.32 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_3D8P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D8P-query.scw
PDB file :
Tito_Scwrl_3D8P.pdb
: