Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKKETRHQLIRSLVSETKVRTQHELRELLEKNGVSVTQATLSRDMKELNLIKVNESSDNATETYYEIHSISQKRWE--ERLRFYMEDALVMLFPVQNQIVLKTLPGLAQSFGSILDSILLPEILATVCGDDTCLIICNNSEEAQKCFEKLSQYTPPFFFSKK
1B4A Chain:A ((4-145))
----GQRHIKIREIIMSNDIETQDELVDRLREAGFNVTQATVSRDIKEMQLVKVPMAN-----GRYKYSLPSDQRFNPLQKLKRALVDVFIKLDGTGNLLVLRTLPGNAHAIGVLLDNLDWDEIVGTICGDDTCLIICRTPKDAKKVSNQLLSML--------
General information:
TITO was launched using:
RESULT:
Template:
1B4A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88193 for 946 contacts (-93.2/contact) +
2D Compatibility (PS) -15522 + (NN) -7609 + (LL) 620
1D Compatibility (HY) -12000 + (ID) 2800
Total energy: -125504.0 ( -132.67 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_1B4A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B4A-query.scw
PDB file :
Tito_Scwrl_1B4A.pdb
: