Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEYLETININHIAPNPYQPRLEFNTKELEELANSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKSYNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGHARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIKIAFANQEELNRIINTLK |
4UMK Chain:A ((55-225)) | -------------------------DSLEELAQSIKEHGLLQPVLV-VSENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEKMREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSSKVQNALLEEKITSGHAKVLVGL-DGEKQELILNSIIGQKLSVRQTEDLARDFKI---------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4UMK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -39125 for 1125 contacts (-34.8/contact) +
2D Compatibility (PS) -18114 + (NN) -1615 + (LL) 5528
1D Compatibility (HY) -16400 + (ID) 3750
Total energy: -73476.0 ( -65.31 by residue)
QMean score : 0.556
|
|
|