Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANPISIDTEMITLGQFLKLADVIQSGGMAKWFLSEHEVLVNDEPDNRRGRKLYVGDVVEIEGFGSFQVVN
1P9K Chain:A ((21-78))
-----------VELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGH-SVQVV-
General information:
TITO was launched using:
RESULT:
Template:
1P9K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28095 for 408 contacts (-68.9/contact) +
2D Compatibility (PS) -6148 + (NN) -1124 + (LL) 548
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -39819.0 ( -97.60 by residue)
QMean score : 0.145
(partial model without unconserved sides chains):
PDB file :
Tito_1P9K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P9K-query.scw
PDB file :
Tito_Scwrl_1P9K.pdb
: