Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYIQNLELTSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGAIPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQRNHFLKQLQTRKQTDRTMLDVLTDQLVEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKIGDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQ-TYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLSELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK |
3QKT Chain:A ((1-298)) | MKLERVTVKNFRSHSDTVVEFKEGINLIIGQNGSGKSSLLDAILV-GLYWPLRIKDIKK-----DEFTKVGAR------DTYIDLIFEKDGTKYRIT---RRFLKGYSS----------------GEIHAMKRLVGNEWKHVTEPSSKAISAFMEKLIPYNIFLNAIYIRQGQIDAILE--SDEAREKVVREVLNLDKFETAYKKLSE--LKGGSGGTEELIEKVKKYKALAREAALSKIGELASEIFAEFTEGKYSEVVVRAEENKVRLFVVWEGKERPLTFLSGGERIALGLAFRLAMSLYLA---GEISLLILDEPTPYLDEERRRKLITIME----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QKT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14604 for 2153 contacts (-6.8/contact) +
2D Compatibility (PS) -31191 + (NN) -8207 + (LL) 6120
1D Compatibility (HY) -17600 + (ID) 3600
Total energy: -69082.0 ( -32.09 by residue)
QMean score : 0.327
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