Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIKKCKQLLMSLVVLTLAVTCLAPMSKAKAASDPIDINASAAIMIEASSGKILYSKNADKRLPIASMTKMMTEYLLLEAIDQGKVKWDQTYTPDDYVYEISQDNSLSNVPLRKDGKYTVKELYQATAIYSANAAAIAIAEIVAGSETKFVEKMNAKAKELGLTDYKFVNATGLENKDLHGHQPEGTSVNEESEVSAKDMAVLADHLITDYPEILETSSIAKTKFREGTDDEMDMPNWNFMLKGLVSEYKKATVDGLKTGSTDSAGSCFTGTAERNGMRVITVVLNAKGNLHTGRFDETKKMFDYAFDNFSMKEIYAEGDQV-KGHKTISVDKGKEKEV--GIVTNKAFSLPVKNGEEKNYKAKVTLNKDNLTAPVKKGTKVGKLTAEYTGDEKDYGFLNSDLAGVDLVTKENVEKANWFVLTMRSIGGFFAGIWGSIVDTVTGWF |
4K91 Chain:A ((9-321)) | ----------------------------------PPQLAAKSYVLMDGESGQVLVENNGDQRLPPASLTKLMTAYIATKEIEAGRIGENDLVTVSEHAWRTGG----SRMFIKVGSQVSVSDLLHGIIIQSGNDASVALAEHIAGSEDAFADMMNTTAQKLGLTNSHFMDATGLPNPDHYS--------------SARDMAVLARAIIYGEP-----SHYAIYAQKEFLWNNIKQPNRNLLL------WRDKTVDGLKTGHTDEAGYCLVASAVRDGQRMIAVVFGT--NSEQARAAETQKLLTYGFRFFESRNFYKKGTELTKG----LVWKGSEHEVKAGLAEDLTMTLP--RGQMQKLQASMVL-EPQLMAPIQQGQVIGKV------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4K91.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -105038 for 2594 contacts (-40.5/contact) +
2D Compatibility (PS) -32832 + (NN) -7686 + (LL) 8928
1D Compatibility (HY) -20800 + (ID) 5800
Total energy: -163228.0 ( -62.93 by residue)
QMean score : 0.512
|
|
|