Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTIGVLGLQGAVREHIHAIEACGAAGLVVKRPEQLNEVDGLILPGGESTTMRRLIDTYQFMEPLREFAAQGKPMFGTCAGLIILAKEIAGSDNPHLGLLNVVVERNSFGRQVDSFEADLTIKGLDEPFTGVFIRAPHILEAGENVEVLSEHNGRIVAAKQGQFLGCSFHPELTEDHRVTQLFVEMVEEYKQKALV
2NV2 Chain:B ((1-193))
MLTIGVLGLQGAVREHIHAIEACGAAGLVVKRPEQLNEVDGLILPGGESTTMRRLIDTYQFMEPLREFAAQGKPMFGTCAGLIILAKEIAGSDNPHLGLLNVVVERNSFGRQVDSFEADLTIKGLDEPFTGVFIRAPHILEAGENVEVLSEHNGRIVAAKQGQFLGCSFNPELTEDHRVTQLFVEMVEEYKQK---
General information:
TITO was launched using:
RESULT:
Template:
2NV2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165574 for 1686 contacts (-98.2/contact) +
2D Compatibility (PS) -20752 + (NN) -4138 + (LL) 512
1D Compatibility (HY) -27600 + (ID) 9600
Total energy: -227152.0 ( -134.73 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_2NV2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NV2-query.scw
PDB file :
Tito_Scwrl_2NV2.pdb
: