Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEPIFIIGIILGLVILLFLSGSAAKPLKWIGITAVKFVAGALLLVCVNMFGGSLGIHVPINLVTTAISGILGIPGIAALVVIKQFII
1B9U Chain:A ((16-31))
-------------LFVLFCMKYVWPPLMA----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1B9U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2359 for 59 contacts (-40.0/contact) +
2D Compatibility (PS) -1682 + (NN) -1291 + (LL) 6444
1D Compatibility (HY) -2400 + (ID) 200
Total energy: -1488.0 ( -25.22 by residue)
QMean score : 0.396
(partial model without unconserved sides chains):
PDB file :
Tito_1B9U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B9U-query.scw
PDB file :
Tito_Scwrl_1B9U.pdb
: