Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKINKDIRTFIDNKQ--IPSVKTSEITASFKTSMENQSSKMKLDQLTRLLSDIEAFGKRLTKSRNF-KDLARFKGLVKRFVKEAVDS--GLSHE------TSKSFDLYGNSRTLGLVKEIDDKLIQLTEEMMDQEKPAIDLLERIGEIKGLLINLYT |
3TKT Chain:A ((83-225)) | MKASKDNATFLNNPKSTVFTLRVGEMMAKAITG----GSPHLVESLVQMDAPKHPKLRRLTQDWFMPKNLARLDGEIRKIANEAIDRMLGAGEEGDFMALVAAPYPLHVVMQILGVPPEDEPKMLFLTQQM-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TKT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 18223 for 584 contacts (31.2/contact) +
2D Compatibility (PS) -11590 + (NN) 475 + (LL) 2488
1D Compatibility (HY) -4400 + (ID) 1650
Total energy: 3546.0 ( 6.07 by residue)
QMean score : 0.462
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