Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKKELFDTVINLEEQIGSLYRQLGDLKQHIGEMIEENHHLQLENKHLRKRLDDTTQQIEKFKADKKESKTQK-----------TEQTDIGEGYDNLARLYQEGFHICNVHYGSVRKEDCLFCLSFLNKK
3U06 Chain:A ((45-161))
MERKELHNTVMDLRDNIRVFCRIRPPLES------EENRMCCTWTYH-----DESTVELQSID-------GQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYG-----------------
General information:
TITO was launched using:
RESULT:
Template:
3U06.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 15553 for 383 contacts (40.6/contact) +
2D Compatibility (PS) -8569 + (NN) 1582 + (LL) 2824
1D Compatibility (HY) -6000 + (ID) 1350
Total energy: 4040.0 ( 10.55 by residue)
QMean score : 0.202
(partial model without unconserved sides chains):
PDB file :
Tito_3U06.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U06-query.scw
PDB file :
Tito_Scwrl_3U06.pdb
: