Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIKEIIVVEGRDDTARIKLAVDADTIE--TNGSAIDDHVIDQIRLAQKTRGVIILTDPDFPGEKIRKTISEAVPGCKHAFLPKHLAKPKNKRGIGVEHASVESIRACLENVHEEMEAQPSDISAEDLIHAGLIGGPAAKCRRERLGDLLKIGYTNGKQLQKRLQMFQIKKSDFMSALDTVMREEQNE
2FCJ Chain:A ((3-84))
-RVEKVIIVEGRSDKQKVAAVLNEPVVIVCTNGT-ISDARLEELADELEGYDVYLLADADEAGEKLRRQFRRMFPEAEHLYIDR--------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2FCJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27551 for 502 contacts (-54.9/contact) +
2D Compatibility (PS) -8877 + (NN) -3264 + (LL) 7660
1D Compatibility (HY) -6000 + (ID) 1050
Total energy: -39082.0 ( -77.85 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_2FCJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FCJ-query.scw
PDB file :
Tito_Scwrl_2FCJ.pdb
: