Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLTTQFYTMLAMSGMGLWLGASLDTYRLFVIRAKTARWLLFIHDILFWIMQGLLFFYVLLHVNEGEFRIYIFLAVLLGVATYQSLCKRIYIKILKFVIYLVVSVYQFFKKLIQHVLFRPIVWTCGAIIWLAAFLFKKTYSLIGFLLLCLYKIVMVLCFPIRFIAKQCLKLLPVKMRLTFRRYFEKGAGFLKKKKKLLITIRTTITRFLKR |
2KHF Chain:A ((2-8)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AWKNFWS- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2KHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -847 for 18 contacts (-47.1/contact) +
2D Compatibility (PS) -610 + (NN) 1027 + (LL) 22484
1D Compatibility (HY) -1200 + (ID) 50
Total energy: 20804.0 ( 1155.78 by residue)
QMean score : 0.475
|
|
|