Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIEVGSKLQGKITGITNFGAFVELPGGSTGLVHISEVADNYVKDINDHLKVGDQVEVKVINVEKDGKIGLSIKKAKDRPQARPRNDFRPKESFEQKMNKFLKDSEDRLSSLKRNTESKRGGRGARRG
1SRO Chain:A ((3-76))
--IEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEA----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1SRO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40907 for 496 contacts (-82.5/contact) +
2D Compatibility (PS) -7574 + (NN) 1238 + (LL) 1964
1D Compatibility (HY) -9600 + (ID) 1950
Total energy: -56829.0 ( -114.57 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_1SRO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SRO-query.scw
PDB file :
Tito_Scwrl_1SRO.pdb
: