Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILMIDNYDSFTYNLVQYLGELGEELVVKRND---SITIDEIEELSPDFLMISPGPCSPDEAGISLEAIKHFAGKIPIFGVCLGHQSIAQVFGGDVVRAERLMHGKTSDIEHDGKTIFEGLKNPLVATRYHSLIVKPETLPSCFTVTAQTKEGEIMAIRHNDLPIEGVQFHPESIMTSFGKEMLRNFIETYRKEVIA
1I7Q Chain:B ((4-183))
-ILLLDNVDSFTYNLVDQLRASGHQVVIYRNQIGAEVIIERLQHMEQPVLMLSPGPGTPSEAGCMPELLQRLRGQLPIIGICLGHQAIVEAYGGQVGQAGEILHGKASAIAHDGEGMFAGMANPLPVARYHSLV--GSNIPADLTVNARFGE-MVMAVRDDRRRVCGFQFHPESILTTHGARLL-------------
General information:
TITO was launched using:
RESULT:
Template:
1I7Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110965 for 1485 contacts (-74.7/contact) +
2D Compatibility (PS) -18645 + (NN) -3562 + (LL) 1704
1D Compatibility (HY) -18400 + (ID) 4000
Total energy: -153868.0 ( -103.61 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_1I7Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I7Q-query.scw
PDB file :
Tito_Scwrl_1I7Q.pdb
: