Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MICQECHERPATFHFTKVVNGEKIEVHICEQCAKENSDSYGISANQGFSIHNLLSGLLNMDSSFQNAGTQMFSHSEQISACPKCGMTFQQFRKIGRFGCSECYKTFHSNITPILRKVHSGNTVHAGKIPKRIGGNLHVRRQIDMLKKELESLIHQEEFENAAHVRD-QIRLLEQSLKSTDSEEEQE |
| 3J3U Chain:A ((416-471)) | -----------------------------------------------------------------------------------------------------------------------------------------LEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3J3U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 435 for 266 contacts (1.6/contact) +
2D Compatibility (PS) -5211 + (NN) -4266 + (LL) 7544
1D Compatibility (HY) -400 + (ID) 800
Total energy: -2698.0 ( -10.14 by residue)
QMean score : 0.588
|
|
|