Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKRIVQAFFIIFGGVVGIFLIPELFVLLNIQDIPLITNAYTSAAIGAIIFFLISIWGTEYVVNWVKWIEDSLLKAPVPDLLFGSLGLVFGLIIAYLIVNVIPLDNIPYRIFSTIIPVFLAFFLGYLGFQVGFKKKDELISLFSISARMQKKKGTADEEHEVQDKKLKILDTSVIIDGRIADICQTGFL-EGVIVIPQFVLEELQHIADSSDVLKRNRGRRGLDILNRI---QKELDIEVEIY--EGDFEDI-----QEVDSKLVKLAKLTSGVVVTND---FNLNKVCELQKVAVLNINDLANAVKPVVLPGEEMNVQVIKDGKEHNQGVAYLDDGTMIVVEEGRNYIGKHIDVLVTSVLQTAAGRMIFAKPKLLEKAL |
| 3I8O Chain:A ((7-122)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------CVDTCVVIDGRITELIERGKLKDATIIIPEAVVSELEYQANMG----REIGYKGIEELRKLIEKASEHNIKVEYYGERPTREEIFLAKSGEIDAMIRKVAKETNSILLTSDWIQYNLAKA-------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I8O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77130 for 723 contacts (-106.7/contact) +
2D Compatibility (PS) -11458 + (NN) -4604 + (LL) 22488
1D Compatibility (HY) -8400 + (ID) 1950
Total energy: -81054.0 ( -112.11 by residue)
QMean score : 0.556
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