Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQQHDYVIGKNAVIETLKSDRKLYKLWMAENTVKGQAQQVIELAKKQGITIQYVPRKKLDQMVTGQHQGVVAQVAAYEYAELDDLYKAAEEKNEQPFFLILDELEDPHNLGSIMRTADAVGAHGIVIPKRRAVGLTTTVAKAST-GAIEHIPVARVTNLARTLEEMKERGIWVVGTDASARE-DFRNMDGNMPLALVIGSEGKGMGRLVKEKCDFLIKLPMAGKVTSLNASVAAGLLMYEVYRKRNPVGE |
1ZJR Chain:A ((20-176)) | -------------------------------------------------------------------------------------------EKRQKDLIVFADNVKNEHNFSAIVRTCDAVGV--LYLYYYHAEGKKAKINEGITQGSHKWVFIEKVDNPVQKLLEFKNRGFQIVATWLSKESVNFREVDYTKPTVLVVGNELQGVSPEIVEIADKKIVIPMYGMAQSLNVSVATGIILYEAQRQREEKG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZJR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75435 for 1216 contacts (-62.0/contact) +
2D Compatibility (PS) -17431 + (NN) -9546 + (LL) 8212
1D Compatibility (HY) -8400 + (ID) 2650
Total energy: -105250.0 ( -86.55 by residue)
QMean score : 0.501
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