Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIMKFFKDVGKEMKKVSWPKGKE-LTRY----TITVISTVIFFVIFFALLDTGISQLIRLIVE
3DIN Chain:D ((10-49))
--------EVIAEAKKISWPSRKELLTSFGVVLVILAVTSVYFFVLDF----------------
General information:
TITO was launched using:
RESULT:
Template:
3DIN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2198 for 114 contacts (-19.3/contact) +
2D Compatibility (PS) -3285 + (NN) 1181 + (LL) 2864
1D Compatibility (HY) -4400 + (ID) 850
Total energy: -6688.0 ( -58.67 by residue)
QMean score : 0.352
(partial model without unconserved sides chains):
PDB file :
Tito_3DIN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DIN-query.scw
PDB file :
Tito_Scwrl_3DIN.pdb
: