Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSAIETKKVVVEEIASKLKESKSTIIVDYRGLNVSEVTELRKQLREA---NVEFKVYKNTMTRRAVEQAELNGLNDFLTGPNAIAFSTE-DVVAPAKVLNDFAKNHEA--LEIKAGVIEGKVSTVEEVKALAELPSREGLLSMLLSVLQAPV-----------RNLALAAKAVAEQKEEQGA
1ZAX Chain:A ((5-177))
-----QQKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLREKYGDGARFRVVKNTLLNLALKNAEYEGYEEFLKGPTAVLYVTEGDPVEAVKIIYNFYKDKKADLSRLKGGFLEGKKFTAEEVENIAKLPSKEELYAMLVGRVKAPITGLVFALSGILRNLVYVLNAIKEKK-----
General information:
TITO was launched using:
RESULT:
Template:
1ZAX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52875 for 1069 contacts (-49.5/contact) +
2D Compatibility (PS) -17055 + (NN) -8918 + (LL) 800
1D Compatibility (HY) -14800 + (ID) 3050
Total energy: -95898.0 ( -89.71 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_1ZAX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZAX-query.scw
PDB file :
Tito_Scwrl_1ZAX.pdb
: