Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALNIEEIIASVKEATVLELNDLVKAIEEEFGVTAAAPVAVAGGAAAGGAAEEQSEFDLILAGAGSQKIKVIKVVREITGLGLKEAKELVDNTPKPLKEGIAKEEAEELKAKLEEVGASVEVK
1RQV Chain:A ((1-120))
-SITKDQIIEAVAAMSVMDVVELISAMEEKFGVSAAAAVAVAAGPVE--AAEEKTEFDVILKAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKALEEAGAEVEVK
General information:
TITO was launched using:
RESULT:
Template:
1RQV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22100 for 791 contacts (-27.9/contact) +
2D Compatibility (PS) -13460 + (NN) -7391 + (LL) -136
1D Compatibility (HY) -11200 + (ID) 3300
Total energy: -57587.0 ( -72.80 by residue)
QMean score : 0.622
(partial model without unconserved sides chains):
PDB file :
Tito_1RQV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RQV-query.scw
PDB file :
Tito_Scwrl_1RQV.pdb
: