Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKQKIRIRLKAYDHRILDQSAEKIVETAKRSGASVSGPIPLPTEKSVYTILRAVHKYKDSREQFEMRTHKRLIDIVNPTPQTVDALMRLDLPSGVDIEIKL
3W1Y Chain:C ((5-102))
----RIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLI---------DQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISL
General information:
TITO was launched using:
RESULT:
Template:
3W1Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32661 for 584 contacts (-55.9/contact) +
2D Compatibility (PS) -9962 + (NN) -4098 + (LL) 1132
1D Compatibility (HY) -11200 + (ID) 2950
Total energy: -59739.0 ( -102.29 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_3W1Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W1Y-query.scw
PDB file :
Tito_Scwrl_3W1Y.pdb
: