Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLPKRVKYRREHRGKMRGRAKGGTEVHFGEFGIQALEASWITNRQIEAARIAMTRYMKRGGKVWIKIFPSKPYTAKPLEVRMGSGKGAPEGWVAVVKPGKVLFEISGVSEEVAREALRLASHKLPIKTKFVKREEIGGESNES
4WF9 Chain:J ((1-141))
MLLPKRVKYRRQHRPKTTGRSKGGNYVTFGEFGLQATTTSWITSRQIESARIAMTRYMKRGGKVWIKIFPHTPYTKKPLEVRMGAGKGAVEGWIAVVKPGRILFEVAGVSEEVAREALRLASHKLPVKTKFVKREELGGET---
General information:
TITO was launched using:
RESULT:
Template:
4WF9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31655 for 997 contacts (-31.8/contact) +
2D Compatibility (PS) -15358 + (NN) -5099 + (LL) -4
1D Compatibility (HY) -16000 + (ID) 5700
Total energy: -73816.0 ( -74.04 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_4WF9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WF9-query.scw
PDB file :
Tito_Scwrl_4WF9.pdb
: