Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVMTDPIADMLTRIRNANMVRHEKLEIPASKLKREIAEILKREGFIRDVEFVEDSKQGIIRVFLKYGQNNERVITGLKRISKPGLRVYAKSNEVPRVLNGLGIAIISTSQGVLTDKEARAKQAGGEVLAYVW
1SEI Chain:A ((1-129))-VMTDPIADMLTAIRNANMVRHEKLEVPASKIKREIAEILKREGFIRDYEYIEDNKQGILRIFLKYGP-NERVITGLKRISKPGLRVYVKAHEVPRVLNGLGIAILSTSQGVLTDKEARQKGTGGEIIAYV-


General information:
TITO was launched using:
RESULT:

Template: 1SEI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73214 for 939 contacts (-78.0/contact) +
2D Compatibility (PS) -13877 + (NN) -3392 + (LL) 284
1D Compatibility (HY) -18000 + (ID) 5500
Total energy: -113699.0 ( -121.09 by residue)
QMean score : 0.621

(partial model without unconserved sides chains):
PDB file : Tito_1SEI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SEI-query.scw
PDB file : Tito_Scwrl_1SEI.pdb: