Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARIAGVDIPRDKRVVISLTYIFGIGRTTAQQVLKEAGVSEDTRVRDLTEEELGKIRDIIDK-LKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRKGPRRTVANKKK
1HR0 Chain:M ((2-122))
-ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVENTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGKKK
General information:
TITO was launched using:
RESULT:
Template:
1HR0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35545 for 754 contacts (-47.1/contact) +
2D Compatibility (PS) -12647 + (NN) -3809 + (LL) 208
1D Compatibility (HY) -11200 + (ID) 3700
Total energy: -66693.0 ( -88.45 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_1HR0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HR0-query.scw
PDB file :
Tito_Scwrl_1HR0.pdb
: