Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKAKTLLMSCFLLLSVTACAPKDQAADMDYDQTKKMVVDILKTDDGKKAIKELLN--DDAMNEALVIDQDAIKGTIEKTLTSKKGEEFWKNIFEDTDFAEGFAKTLQTEHEKVIKKLMKDPDYQKMLMSVMQDPGMDKKYSQLAKSQEFRSYLEEVINETLSSPLYKKQFEDELKKAAKDTAKESE |
3PGX Chain:A ((42-126)) | -------IIACDICAPVSASVTYAPASPEDLDETARLV-----EDQGRKALTRVLDVRDDAALRELVADGMEQFGRLD-VVVANAGVLSWGRVWELTD----------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PGX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1633 for 427 contacts (3.8/contact) +
2D Compatibility (PS) -8489 + (NN) 1509 + (LL) 8176
1D Compatibility (HY) -4400 + (ID) 1250
Total energy: -2821.0 ( -6.61 by residue)
QMean score : 0.204
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