Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPLLTPTSVVLGVLLSQFLNGYEWAVPWIFAFITFAGSLSANFQSLRHALSHPLPMILALFVLHIFMPLFAWGSGHLIFKGDPLTITGLTLAVVIPTGITSLIWAAMYKGNVGLTLSIILVDTVLSPLIVPLSLSLLAGAQVHMDVWGMMKGLIVMVVIPSFLGMLFNQMSSPERTAFVSSALSPFSKLCLMAVIAINSSAIAPYFKSIDLRFAGIAVTVFFIALTGYAAAWLIGKMMKRRQEEIVSLIFTGGMRNISAGAVLAVTFFPSQVAVPVVIGMLFQQILAALFGYMLNRFELKPMLQKA |
4N7X Chain:A ((40-283)) | -------------------------------LIMFAMGVTLRLDDFKRVLSRPAPVAAATFLHYLIMPLTAWILA-MLFRMPPDLSAGMVLVGSVASGTASNVMIYLAKGDVALSVTISAVSTLVGVFATPLLTRLYVDATISVDVVGMLKSILQIVVIPITAGLVIHHTFT-KTVKRIEPYLPAMSMVCILAIISAVVAGSQSHIASVGFV---VIIAVILHNGIGLLSGYWGGKLFGFDESTCRTLAIAVGMQNSGLAATLGKIYFSPLAALP---GALFS----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N7X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -268981 for 2156 contacts (-124.8/contact) +
2D Compatibility (PS) -24977 + (NN) -3189 + (LL) 5684
1D Compatibility (HY) -18400 + (ID) 3150
Total energy: -313013.0 ( -145.18 by residue)
QMean score : 0.340
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