Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYSKQWTRIILITSPFAIALSLLLSILYGAKHLSTDIVFTSLIHFDPGNTDHQIIWHSRIPRAAGALLIGAALAVSGALMQGITRNYLASPSIMGVSDGSAFIITLCMVLLPQSSSIEMMIYSFIGSALGAVLVFGLAAMM--PNGFTPVQLAIIGTVTSMLLSSLSAAMSIYFQISQDLS---FWYSARLHQMSPDFLKLAAPFFLIGIIMAIS-LSKKVTAVSLGDDISKSLGQKKKTIKIMAMLSVIILTGSAVALAGKIAFVGLVVPHITRFLVGSDYSRLIPCSCILGGIFLTLCDLASRFINYPFETPIEVVTSIIGVPFFLYLIKRKGGEQNG |
4DBL Chain:A ((75-347)) | ------------------------------------------------------VWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAG-VGLIAAVLLGQG---QLPNWALGLSAIAGALIITLILLRFARRHLSTSRLLLAGVALGIISSAL-MTWAIYFSTSVDLRQLMYWMMGGFGGV--DWRQSWLMLALIPVLLWISSQSRPMNMLALGEISARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILRLSGLTDHRVLLPGCALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLLKA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244263 for 2223 contacts (-109.9/contact) +
2D Compatibility (PS) -27241 + (NN) -2656 + (LL) 4080
1D Compatibility (HY) -20800 + (ID) 4300
Total energy: -295180.0 ( -132.78 by residue)
QMean score : 0.304
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