Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKTLFIFSAILTLSIFAPNETFAQTAGNLIEPKIINAETAQFSTKKLRKVDQMI-ERDIAAGFPGAVLVVVKDGRIIKKAAYGYSKKYEGSELLRRPAKMKTRTMFDLASNTKMYATNFALQRLVSQGKLDVYEKVSAYLPGFKDQPGDLIKGKDKIRVID-VLQHQSGLPSSFYFYTPEKAGKYYSQ------------ERDKTIEYLTKIPLDYQTGTKHVYSDIGYMLLGCIVEKLTGKPLDVYTEQELYKPLRLKHTLYNPLQKGF---KPKQFAATERMGN-----TRDGVIQFPNIRTNTLQGEVHDEKAFYSMDGVSGHAGLFSNADDMAILLQVMLNKGSYRNISLFDQKTADLFTAPSAT-DPTFALGWRR------------NGSKSMEWMFGPHASENAYGHTGWTGTVTIIDPAYNLGIALLTNKKHTPVIDPEENPNVFEGDQFPTGSYGSVITAIYEAME |
| 1CI9 Chain:A ((15-380)) | ----------------------------------------AASLAARLDAVFDQALRERRLV----GAVAIVARHGEILYRRAQGLADREAG-----RP--MREDTLFRLASVTKPIVA-LAVLRLVARGELALDAPVTRWLPEFRPR---LADGSEPLVTIHHLLTHTSGL----GYWLLEGAGSVYDRLGISDGIDLRDFDLDENLRRLASAPLSFAPGSGWQYS-LALDVLGAVVERATGQPLAAAVDALVAQPLGMRDC-------GFVSAEPERFAVPYHDGQPEPVRMRDG-IEVPLPEGHGAAVRFAPSRVFEPGAYPSGGAGMYGSADDVLRALEAIRANPGFLPETLADAARRDQAGVGAETRGPGWGFGYLSAVLDDPAAAGTPQHAGTLQW-------GGVYGHS-W-----FVDRALGLSVLLLTNTAYEGMSGP----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CI9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94470 for 2805 contacts (-33.7/contact) +
2D Compatibility (PS) -34779 + (NN) -13581 + (LL) 5796
1D Compatibility (HY) -17200 + (ID) 5100
Total energy: -159334.0 ( -56.80 by residue)
QMean score : 0.444
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