Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSCPEQIVQLMHMHLDGDILPKDEHVLNEHLETCEKCRKHFYEMEKSIALVRSTSHVEAPADFTANVMAKLPKEKKRASVKRWFRTHPVIAAAAVFIILMGGGFFNSWHNDHNFSVSKQPNLVVHNHTVTVPEGETVKGDVTVKNGKLIIKGKIDG-DVTVVNGEKYMASAGQVTGQIEEINQLFDWTWYKMKSAGKSVLDAFNPNGEE |
3DUG Chain:A ((7-48)) | -----------------------------------------------------------------------------------------------------------------------DFLIKSKGYLDIQTGEIIKADLLIRNGKIAEIGKINTKDATVIS---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DUG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1786 for 204 contacts (-8.8/contact) +
2D Compatibility (PS) -4551 + (NN) -1921 + (LL) 11756
1D Compatibility (HY) -2400 + (ID) 700
Total energy: 398.0 ( 1.95 by residue)
QMean score : 0.531
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