Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFEDIPFLQYLGNAVDILLVWYVIYKLIMVIRGTKAVQLLKGIVVIVLVRMASQYLGLSTLQWLMDQAITWGFLAIIIIFQPELRRALEQLGRGRFFSRSGTPVEEAQQKTIEAITKAINYMAKRRIGALLTIERDTGMGDYIETGIPLNAKVSSELLINIFIPNTPLHDGAVIMKNNEIAAAACYLPLSESPFISKELGTRHRAAVGISEVTDSLTIIVSEETGGVSVAKNGDLHRELTEEALKEMLEAEFKKNTRDTSSNRWYWRGKKNG
2FB5 Chain:A ((80-201))
-------------------------------------------------------------------------------------------------------------------ITTAIQHLSARKHGALIVVERNETLEALIQTGTTLNAHLTAPLLESIFYPGNPLHDGAVLVKNNHIVSAANILPLTKSTEVDPELGTRHRAAIGLSEKSDALILVVSEETGRTSFALNGILY------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2FB5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113076 for 954 contacts (-118.5/contact) +
2D Compatibility (PS) -13220 + (NN) -7260 + (LL) 14192
1D Compatibility (HY) -10400 + (ID) 3150
Total energy: -132914.0 ( -139.32 by residue)
QMean score : 0.660
(partial model without unconserved sides chains):
PDB file :
Tito_2FB5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FB5-query.scw
PDB file :
Tito_Scwrl_2FB5.pdb
: