Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSANLTDFVTKTIEEMNSFDRENMECIKKLIRKAIDFYHLKSYEEVEETHSGNVRFLHVHSMMEENMLSKMIVVTRNGKTDLDIEGVYEGYVVREY
2V6X Chain:A ((8-62))
------DFLTKGIE---------------LVQKAIDLDTATQYEEAYTAYYNGLDYLMLALKYEKNPKSKDLIRAK--------------------
General information:
TITO was launched using:
RESULT:
Template:
2V6X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9471 for 337 contacts (-28.1/contact) +
2D Compatibility (PS) -5683 + (NN) -1182 + (LL) 2568
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -17518.0 ( -51.98 by residue)
QMean score : 0.093
(partial model without unconserved sides chains):
PDB file :
Tito_2V6X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V6X-query.scw
PDB file :
Tito_Scwrl_2V6X.pdb
: