Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKSKGSIESEISKSITQWEKDYLGRGSVSVKTDILRDMIIVNLKGILTPAEYVVCGSKEGMLSIKQTRSELVESGIEGLKDIILKITGEKVKSFHTDLSSRTGERVMVFKLCNDLEKNLEKIL
1XZP Chain:A ((388-470))
----KGEGLEKLEESIYRETQEIFERGSDSLITNLRQKQLLENVKGHL---EDAIKSLKEGM------PVDMASIDLERALNLLDEVTG---RSFREDL-------------------------
General information:
TITO was launched using:
RESULT:
Template:
1XZP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20228 for 425 contacts (-47.6/contact) +
2D Compatibility (PS) -8673 + (NN) -493 + (LL) 3292
1D Compatibility (HY) -2400 + (ID) 1250
Total energy: -29752.0 ( -70.00 by residue)
QMean score : 0.311
(partial model without unconserved sides chains):
PDB file :
Tito_1XZP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XZP-query.scw
PDB file :
Tito_Scwrl_1XZP.pdb
: