Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLLFTAVISVPMLLLAVSVLMSVIYDSMFKPMNHGMPFHRSFAYPAMIVVFLISLLLLAFLFSKSIHSLLHKINLLNQTIRHLASDQRVPDKIEVKRADEIGELIKSVNLLIERTTYRELELRQQEEIKKELLQKLRHDINTPLTALRLQLFYLEDQCHGQAVFESLYQQIEYISELTNEFNLYSAETLESSYIVNEEVRLNELLETAVKKWDYLYSMSGIEL--HYKPADQDVIWMSNTLWMERLFDNIFQNTLRHSKAK---KMEVTIEHGDVFIRDDGIGF-------------------DRNESSEGLGLKIIEDTCRLLAITYELHTNDNGTGFLFSKE |
4BIV Chain:A ((80-266)) | --------------------------------------------------------------------------------------------------------------------------------QQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDL-LVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNAL--ESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVE-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BIV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49020 for 983 contacts (-49.9/contact) +
2D Compatibility (PS) -17366 + (NN) -4199 + (LL) 14440
1D Compatibility (HY) -8000 + (ID) 2150
Total energy: -66295.0 ( -67.44 by residue)
QMean score : 0.380
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