Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANKELKRGLGARHIQMIALGGTIGVGLFMGSASTISWTGPSVLLAYAICGIFIFFIMRAMGEMLYVEPSTGSFATFGHQYIHPMAGYITAWSNWFQ-WIIVGMSEIIAVGSYTKYWFPDLPA----WIPGIVAMVILGAANLISVKSFGEFEFWFAMIKIVTIILMIIAGIGIIFFG-FGNGGDAIGLSNLWSHGGFFAGGFSGFFFALSLVIAAYQGVELIGITAGEAKDPQNTLRNAIQSIIWRILI---FYIGAIFVIVTVYPWDELNSLGSPF-VSTFSKIGITAAAGIINFVVITAAMSGCNSGIFSAGRMLYTLGVNGQAPKFFKKISRNGVPLYGTIAVLIGLAVGVVLNYIAPPKIFVYVYSASVLPGMIPWF-----IILISHIGFRKAKGAALDKHPFKMPFAPFTNYLTIAFLLMVLVGMWFNDDTRISLIVGVIFLALVVISYYVFGIGKRTQANLTKSEQAAE |
| 3OB6 Chain:A ((5-388)) | ----ADAHKVGLIPVTLMVSGNIMGSGVFLLPANLAS-TGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGAIAMVVIGVG-YLSYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITR-------VQAVATVLALIPIVGIAVFGWFWFRGETYMAA--WNVSGL--GTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPK---RNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGA-IVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTI-FQLSSISP----GLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYL------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OB6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -332511 for 3241 contacts (-102.6/contact) +
2D Compatibility (PS) -37008 + (NN) -1584 + (LL) 8276
1D Compatibility (HY) -24400 + (ID) 4950
Total energy: -392177.0 ( -121.00 by residue)
QMean score : 0.303
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