Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKQQPISQRKLLGVAGLGWLFDAMDVGILSFIIAALHVEWNLSPEEMKWIGSVNSIGMAAGAFLFGLLADRIGRKKVFIITLLCFSIGSGISAFVTSLSAFLILRFVIGMGLGGELPVASTLVSEAVVPEKRGRVIVLLESFWAVGWLAAALISYFVIPSFGWQAALLLTALTAFYALYLRTSLPDSPKY------------------------------ESLSAKKRSMWENVKSVWARQYIRPTVMLSIVWFCVVFSYYGMFLWLPSVM-----------LLKGFSMIQSFEYVLLMTLAQLPGYFSAAWLIEKAGRKWILVVYLIGTAGS-------AYFFGTADSLSLLLTA-GVLLSFFNLGAWG-VLYAYTPEQYPTAIRATGSGTTAAFGRIG----GIFGPLLVGTLAARHISFSVIFSIFCIAILLAVACILIMGKETKQTELE
4LDS Chain:A ((22-427))-------------------------DNGVISGALLFIHKDIPLNSTTEGIVVSSMLIGAIVGAGSSGPLADKLGRRRLVMLIAIVFIIGALILAASTNLALLIIGRLIIGLAVGGSMSTVPVYLSEMAPTEYRGSLGSLNQLMITIGILAAYLVNYAFADIEGWRWMLGLAVVPSVILLVGIYFMPESPRWLLENRNEEAARQVMKITYDDSEIDKELKEMKEINAISESTWTVIKSPWLGR---------ILIVGCIFAIFQQFIGINAVIFYSSSIFAKAGLGEAASILGSVGIGTINVLVTIVAIF----VVDKIDRKKLLVGGNIGMIASLLIMAILIWTIGIASSAWIIIVCLSLFIVFFGI-SWGPVLWVMLPELFPMRARGAATGISALVLNIGTLIVSLFFPILSDALSTEW-----VFLIFAFIGVLAMIFVIKFLPETRG----


General information:
TITO was launched using:
RESULT:

Template: 4LDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1561 -250775 -160.65 -712.43
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -160.65
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.253

(partial model without unconserved sides chains):
PDB file : Tito_4LDS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LDS-query.scw
PDB file : Tito_Scwrl_4LDS.pdb: