Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQGVIGDGQVGVTSYVVP-KGAMAFWEKRLEKFNVPYTKIERFGEQ-YVEFDDPHGLHLEIVEREEGEA----NTWTFGEVTPDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEGDFVRYRS-AGDIGNVIDLKLTPIGRGQMGAGTVHHIAWRANDDEDQLDWQRYIASHGYGVTPVRDRNYFNAIYFREHGEILFEIATDPPGFAHDETQETMGEKLMLPVQYEPHRTQIEQGLLPFEVRELD
1ZSW Chain:A ((30-336))------GHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRL-VLLVSNGEKVEHWETWEKSEVPAKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQEAIFQSIKGEAFGEIVVKYLDGPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATDGPGFTVDGDVEHLGEKLDLPPFLEDQRAEIEANLAPIE-----


General information:
TITO was launched using:
RESULT:

Template: 1ZSW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1668 -132747 -79.58 -442.49
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -79.58
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.541

(partial model without unconserved sides chains):
PDB file : Tito_1ZSW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ZSW-query.scw
PDB file : Tito_Scwrl_1ZSW.pdb: