Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDDFKLDKPTPYYLQFYNQLKKMIFNGTFKPGERINETQLAKSFGVSRSPIREAMRLLEKDGLLKADDRNGFSITSLTAKDVDEIYKIRIPLEQLAVELVIDEADEEELTILEKQLEETEKAIHNGTEDTEIIRLNQKFHELLVDFSHNRHLKNLLEH-VNDLIHFCRILNYTGDHRAETILREHRRIFEEVKKKNKEAAKQHVLAHFNHDCEHLKHVLEEGKEN
3C7J Chain:A ((34-233))------------------KLRNAIIDGSLPSGTALRQQELATLFGVSRMPVREALRQLEAQSLLRVETHKGAVVAPLITEDAVDAYALRILLESEALRLSIPLLDADDLAAAASYIEQLEVE----TDFGQIGRLNRMFHLSLYAKTHNKRLMRLVEEGLNEEERFLR-FNLSSMGLGKLSQDDHWQLLRLAEQKAVEPCVEALQYHLNRGVQAVTQYLQSQK--


General information:
TITO was launched using:
RESULT:

Template: 3C7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 710 -77874 -109.68 -391.33
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -109.68
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.618

(partial model without unconserved sides chains):
PDB file : Tito_3C7J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C7J-query.scw
PDB file : Tito_Scwrl_3C7J.pdb: