Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSIIGRFKDIMSANINALLDKAENPEKMVDQYLRNMNSDLAKVKAETAAVMAEEQRAKREYHECQADMEKMESYAMKALQAGNESDARKFLERKTSLESKLSELQAANQIAATNAAQMRKMHDKLVSDIGELEARKNMIKAKWAVAKTQERMNKLGASVSSTSQSMSAFGRMEDKVNKALDQANAMAELNSAPQDDMADLSAKYDTGGSSQVDDELAALKAKMMLDK
4YKN Chain:A ((148-353))-------------------EKSREYDRLYEEYTRTSQ----EIQMKRTAIEAFNETIKIFEEQCQTQERYSKEYIEKFKREGNEKEIQRIMHNYDKLKSRISEIIDSRR-------RLEEDLKKQAAEYREIDKRMNSIK---------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4YKN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 163 -8181 -50.19 -74.37
target 2D structure prediction score : 0.92
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -50.19
2D Compatibility (Sec. Struct. Predict.) : 0.92
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.666

(partial model without unconserved sides chains):
PDB file : Tito_4YKN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YKN-query.scw
PDB file : Tito_Scwrl_4YKN.pdb: