Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKAARWHNQKDIRIEHIEEPKTEPGKVKIKVKWCGICGSDLHEYLGGPIFIPVDKPHPLTNETAPVTMGHEFSGEVVEVGEGVENYKVGDRVVVEPIFAT----HGHQGAYNLDEQMGFLGLAGGGGGFSEYVSVDEELLFKLPDELSYEQGALVEPSAVALYAVRSSKLKAGDKAAVFGCGPIGLLVIEALKAAGATDIYAVELSPERQQKAEELGAI-IVDPSKTDDVVAEIAERTG---GGVDVAFEVTGVPVVLRQAIQSTTIAGETVIVSIWEKG--AEIHPNDIVIKERTVKGIIGYRDIFPAVLSLMKEGYFSADKLVTKKIVLD---DLIEEGFGALIKEKSQVKILVRPN
4EJ6 Chain:A ((25-363))-KAVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLL------------HGEFPSTPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGG-FAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPS-AGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPFVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAA-----GEVKVLVIPS


General information:
TITO was launched using:
RESULT:

Template: 4EJ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2007 -226585 -112.90 -695.05
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -112.90
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.482

(partial model without unconserved sides chains):
PDB file : Tito_4EJ6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4EJ6-query.scw
PDB file : Tito_Scwrl_4EJ6.pdb: