Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVFLIGANGQIGQRLVSLFQDNPDHSIRAMVRKEEQKASLEAAGAEAVLANLEGSPEEIAAAAKGCDAIIFTAGSGGSTGYDKTLL-VDLDGAAKAIEAAAIAGIKRFIMVSALQAHNRENW----NEALKPYYVAKHYADKIL-EASGLTYTIIRPGGLRNEPGTGTVSAAKDLERGFISRDDVAKTVIASLDEKNTENRAFDLTEGDTPIAEALKKL
3DQP Chain:A ((2-211))-KIFIVGSTGRVGKSLLKSLS-TTDYQIYAGARKVEQVP--QYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGG-----KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQPGALTEEEATGLIDINDEVSASN-TIGDVADTIKELVMTDHSIGKVISMHNGKTAIKEALESL


General information:
TITO was launched using:
RESULT:

Template: 3DQP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1135 -121586 -107.12 -596.01
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -107.12
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.461

(partial model without unconserved sides chains):
PDB file : Tito_3DQP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DQP-query.scw
PDB file : Tito_Scwrl_3DQP.pdb: