Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISLQSDQLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEEVMLTDIPRLHINDPIMKGFGMVINNGFVCVENDEQVFEGIFTRRVVLKELNKHIRSLNK
2EMQ Chain:A ((10-144))----------QMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERIEFERLETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPFVCVENDDGYFAGIFTRREVLKQLNKQLHRP--


General information:
TITO was launched using:
RESULT:

Template: 2EMQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 579 -113206 -195.52 -838.56
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.89

3D Compatibility (PKB) : -195.52
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.89
QMean score : 0.409

(partial model without unconserved sides chains):
PDB file : Tito_2EMQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2EMQ-query.scw
PDB file : Tito_Scwrl_2EMQ.pdb: