Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLRQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAETE
2B5Y Chain:A ((1-148))MKLRQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAETE


General information:
TITO was launched using:
RESULT:

Template: 2B5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 732 -75137 -102.65 -507.68
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 1.00

3D Compatibility (PKB) : -102.65
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 1.00
QMean score : 0.678

(partial model without unconserved sides chains):
PDB file : Tito_2B5Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2B5Y-query.scw
PDB file : Tito_Scwrl_2B5Y.pdb: