Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQKAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTSNDEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGHRELPIRADYIGKNIPTSKSEKVMVQLDEVDQNDLVAIYENE
1A3C Chain:A ((3-180))--QKAVILDEQAIRRALTRIAHEMIERNK----CILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYR--------NDEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGHRELPIRADYIGKNIPTSKSEKVMVQLDEVDQNDLVAIYEN-


General information:
TITO was launched using:
RESULT:

Template: 1A3C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 875 -119091 -136.10 -717.42
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.97

3D Compatibility (PKB) : -136.10
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.97
QMean score : 0.592

(partial model without unconserved sides chains):
PDB file : Tito_1A3C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1A3C-query.scw
PDB file : Tito_Scwrl_1A3C.pdb: