Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNGIAWMIVFCEIAFWVVIVLGLAVRYVFKRHTLGLLFLALTP----VIDLI---LLAATGVDLYRGASATAAHGIAAVYIGISIAYGKQMIQWADEKFQYYVTKKGTKPLKRFGMDHAKHGAKGWLRHVLAYLIGAGLLAGMIYFINDSSRTEALSGILKLWTVIIGIDFLITASYFIWPKKEKASANLRS
5CC2 Chain:A ((69-156))---------------------GLVGELVFKRADIGISALTITPDRENVVDFTTRYMDYSVGVLLRRGTSIQSLQDLSK---QTDIPYGTVL----DSAVYQHVRMKGLNPFERDSM----------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5CC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 148 -25689 -173.57 -317.14
target 2D structure prediction score : 0.27
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -173.57
2D Compatibility (Sec. Struct. Predict.) : 0.27
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.007

(partial model without unconserved sides chains):
PDB file : Tito_5CC2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CC2-query.scw
PDB file : Tito_Scwrl_5CC2.pdb: