Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKAIQSSMWREFGLMCTVGIGDNMLLSKLALDLESKKTKSGIARWRYEDVPNRLWKVRPLSKMWGIGGRMERNLNRMGISTVGQLAKFPLELLEKKFGIMGNQLYYHAHGIDLSEIGAPLMQGQISFGKSQILFRDYTKREEIKAVLLEICEEVARRARTYNKVGRTISLGIGYSKDELGGGFHRSKTIDFPTNITMDIYKCCLMFFNKFYSGKKQ
4R8U Chain:A ((122-273))IAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVIT---PAEVPAFLQTL-PLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKFGRILWERSQGIDERDVNSERLRK--SVGVERTMAEDIHHWSECEAIIERLYPELERR-----------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4R8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 442 -55307 -125.13 -363.86
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -125.13
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.402

(partial model without unconserved sides chains):
PDB file : Tito_4R8U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R8U-query.scw
PDB file : Tito_Scwrl_4R8U.pdb: